Basic Information
Locus ID:
Oco21G009490
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 16479194 | 16481865 | + | Oco21G009490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 56,681.10 Da | 43.20 | 98.71 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 218 | 365 | 2.0E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 200 | 467 | 2.4E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 290 | 370 | 1.7E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 183 | 289 | 2.3E-24 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 11 | 122 | 3.3E-20 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 473 | 9.7E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 217 | 504 | 22.61936 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 223 | 245 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_040384685.1 | putative cysteine-rich receptor-like protein kinase 35 isoform X1 [Oryza brachyantha] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 0 | |
| TrEMBL | A0A679BCW7 | S-receptor kinase-like protein 1-like OS=Oryza nivara OX=4536 GN=BBa0083C03.28 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2134, BH04.2218, CH04.2559 |
| Poaceae | Oryza coarctata | 3 | Oco21G009490, Oco21G009540, Oco22G010880 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g44660.1, LOC_Os11g44690.1 |