Basic Information
Locus ID:
Oco21G008770
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 15669321 | 15670424 | - | Oco21G008770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 40,031.86 Da | 40.89 | 82.48 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 179 | 300 | 2.39889E-51 | - |
| CDD | cd00121 | MATH | 36 | 166 | 4.98913E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 191 | 302 | 3.1E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 169 | 302 | 8.79E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 33 | 174 | 1.26E-26 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 35 | 166 | 5.4E-25 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 169 | 298 | 1.3E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 302 | 366 | 2.4E-16 | - |
| SMART | SM00225 | BTB_4 | 193 | 303 | 4.0E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 35 | 163 | 19.828413 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 193 | 260 | 15.845457 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_052137180.1 | BTB/POZ and MATH domain-containing protein 2-like [Oryza glaberrima] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0MHF7 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco21G008770, Oco22G010040 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g41350.1 |