Basic Information
Locus ID:
Oco21G007030
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 13765125 | 13771950 | + | Oco21G007030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 64,460.21 Da | 40.23 | 94.75 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 178 | 220 | 1.58997E-9 | IPR018392 |
| CDD | cd00118 | LysM | 113 | 159 | 3.00456E-9 | IPR018392 |
| CDD | cd14066 | STKc_IRAK | 261 | 547 | 1.35626E-97 | - |
| Pfam | PF01476 | LysM domain | 178 | 221 | 8.6E-9 | IPR018392 |
| Pfam | PF01476 | LysM domain | 114 | 160 | 1.1E-7 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 258 | 541 | 2.5E-49 | IPR001245 |
| SUPERFAMILY | SSF54106 | LysM domain | 113 | 161 | 2.62E-6 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 242 | 544 | 1.28E-82 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 176 | 222 | 4.58E-8 | IPR036779 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 167 | 226 | 3.3E-11 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 227 | 330 | 7.5E-37 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 111 | 166 | 1.2E-11 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 331 | 554 | 2.2E-58 | - |
| SMART | SM00257 | LysM_2 | 177 | 221 | 8.2E-10 | IPR018392 |
| SMART | SM00220 | serkin_6 | 255 | 545 | 1.2E-36 | IPR000719 |
| SMART | SM00257 | LysM_2 | 113 | 160 | 3.5E-5 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 112 | 159 | 12.524017 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 176 | 220 | 13.077649 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 255 | 560 | 38.661449 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 376 | 388 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 261 | 283 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 592 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015615534.1 | cysteine-rich receptor-like protein kinase 6 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | B8BKZ6 | Protein kinase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36434 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco21G007030, Oco21G007040 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g34610.1, LOC_Os11g34624.1 |