Basic Information
Locus ID:
Oco21G004300
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 5798473 | 5800702 | - | Oco21G004300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 15,055.02 Da | 38.81 | 78.45 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 15 | 123 | 4.7E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 117 | 9.0E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 85 | 4.8E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 129 | 12.923436 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21400.4 | - | 0 |
| RefSeq | XP_037438964.1 | putative receptor-like protein kinase At4g00960 [Triticum dicoccoides] | 0 |
| O65405 | Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2 | 0 | |
| TrEMBL | A0A3B6HPJ9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 1 | Oco21G004300 |
| Poaceae | Thinopyrum elongatum | 4 | Tel3E01G885600, Tel3E01G885700, Tel5E01G016300 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG066900 |
| Poaceae | Triticum aestivum | 1 | TraesCS4A02G026700.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-57907 |