Basic Information
Locus ID:
Oco21G003340
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 3766903 | 3769451 | - | Oco21G003340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 85,009.82 Da | 45.04 | 82.68 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 470 | 762 | 3.21791E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 465 | 755 | 1.0E-42 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 132 | 322 | 1.12E-13 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 447 | 760 | 3.15E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 440 | 551 | 2.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 552 | 774 | 2.1E-49 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 63 | 333 | 3.7E-19 | IPR009091 |
| SMART | SM00220 | serkin_6 | 464 | 764 | 2.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 464 | 764 | 36.004257 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 599 | 611 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 470 | 492 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 513 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_040385047.1 | serine/threonine-protein kinase-like protein CCR4 [Oryza brachyantha] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0MDZ0 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology