halophFGD

Basic Information

Locus ID: Oco21G003120

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description: WD domain, G-beta repeat

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG21	3289704	3295317	+	Oco21G003120

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.53	50,188.45 Da	42.08	96.64	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF18052	Rx N-terminal domain	363	441	1.4E-9	IPR041118
Pfam	PF00069	Protein kinase domain	2	266	1.1E-34	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	2	271	1.35E-51	IPR011009
Gene3D	G3DSA:1.20.5.4130	-	363	445	2.9E-7	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	66	1.6E-5	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	82	280	3.7E-47	-
SMART	SM00220	serkin_6	26	270	9.4E-9	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	269	30.166916	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	120	132	-	IPR008271
Coils	Coil	Coil	391	411	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G56140.1	Leucine-rich repeat transmembrane protein kinase.
RefSeq	XP_052135855.1	uncharacterized protein LOC127754387 isoform X2 [Oryza glaberrima]
Swiss-Prot	C0LGH3	Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2
TrEMBL	E0CWA6	Stemrust kinase OS=Oryza coarctata OX=77588 GN=OC_Ba202M20.6 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH02.601, AH04.1917, AH04.2063, AH04.984, AH04.986, BH04.535 ... BH04.1946, BH04.1947, BH04.904, BH04.934, CH03.3, CH04.1408, CH04.1624, CH04.2111, CH04.2290, CH04.2291
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_5AG0396410, gene-QOZ80_5BG0442950 ... gene-QOZ80_9AG0683790, gene-QOZ80_9AG0685340, gene-QOZ80_9BG0695800, gene-QOZ80_9BG0711440
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0008320.1, HORVU.MOREX.r3.2HG0098680.2 ... HORVU.MOREX.r3.2HG0098670.1.CDS1, HORVU.MOREX.r3.2HG0208840.1, HORVU.MOREX.r3.5HG0420370.1
Poaceae	Lolium multiflorum	16	gene-QYE76_003210, gene-QYE76_007483, gene-QYE76_007487 ... gene-QYE76_007511, gene-QYE76_007922, gene-QYE76_009318, gene-QYE76_009320, gene-QYE76_019664, gene-QYE76_019666, gene-QYE76_019668, gene-QYE76_019669, gene-QYE76_036521, gene-QYE76_036532, gene-QYE76_036739, gene-QYE76_040477, gene-QYE76_056771
Poaceae	Oryza coarctata	4	Oco09G005010, Oco21G003120, Oco22G003930, Oco22G003940
Poaceae	Oryza sativa	9	LOC_Os04g30030.1, LOC_Os04g30040.2, LOC_Os11g10640.1 ... LOC_Os11g10710.1, LOC_Os11g17380.1, LOC_Os11g39420.1, LOC_Os11g39450.1, LOC_Os11g39490.1, LOC_Os11g39530.1
Poaceae	Paspalum vaginatum	19	gene-BS78_05G059300, gene-BS78_05G121900, gene-BS78_K001200 ... gene-BS78_05G125100, gene-BS78_05G188700, gene-BS78_05G205700, gene-BS78_05G205900, gene-BS78_06G012700, gene-BS78_06G018400, gene-BS78_06G226600, gene-BS78_07G159200, gene-BS78_08G008700, gene-BS78_08G073500, gene-BS78_08G093200, gene-BS78_08G105000, gene-BS78_09G057500, gene-BS78_K312800, gene-BS78_K312900, gene-BS78_K313000
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0106583, Pt_Chr0106605, Pt_Chr0202873, Pt_Chr0205823 ... Pt_Chr0207584, Pt_Chr0500272, Pt_Chr0500273, Pt_Chr0500275, Pt_Chr0702007, Pt_Chr0702066, Pt_Chr0702067, Pt_Chr0704769, Pt_Ctg00314, Pt_Ctg00315
Poaceae	Sporobolus alterniflorus	2	Chr26G000510, Chr27G002390
Poaceae	Thinopyrum elongatum	36	Tel1E01G111500, Tel1E01G154200, Tel2E01G023100 ... Tel2E01G023200, Tel2E01G070500, Tel2E01G070600, Tel2E01G070700, Tel2E01G070900, Tel2E01G071200, Tel2E01G071500, Tel2E01G072100, Tel2E01G073300, Tel2E01G963200, Tel2E01G963300, Tel3E01G001000, Tel3E01G020800, Tel3E01G020900, Tel3E01G886000, Tel3E01G886100, Tel5E01G016400, Tel5E01G651000, Tel5E01G680100, Tel5E01G891100, Tel6E01G109400, Tel6E01G109900, Tel6E01G112800, Tel6E01G113000, Tel6E01G113200, Tel6E01G739900, Tel7E01G002300, Tel7E01G807200, Tel7E01G807300, Tel7E01G807400, Tel7E01G825700, Tel7E01G856200, Tel7E01G858000
Poaceae	Triticum dicoccoides	37	gene_TRIDC1AG000060, gene_TRIDC1AG010440 ... gene_TRIDC1BG013170, gene_TRIDC1BG013210, gene_TRIDC1BG056560, gene_TRIDC1BG070910, gene_TRIDC2AG002440, gene_TRIDC2AG002460, gene_TRIDC2BG002130, gene_TRIDC2BG002660, gene_TRIDC2BG002670, gene_TRIDC2BG002680, gene_TRIDC2BG002720, gene_TRIDC2BG002770, gene_TRIDC2BG002880, gene_TRIDC2BG002890, gene_TRIDC2BG081640, gene_TRIDC2BG085800, gene_TRIDC3BG000040, gene_TRIDC4AG003690, gene_TRIDC4AG072350, gene_TRIDC4BG057810, gene_TRIDC5AG001080, gene_TRIDC5AG059860, gene_TRIDC5AG062460, gene_TRIDC5BG001040, gene_TRIDC5BG001070, gene_TRIDC5BG001150, gene_TRIDC5BG009700, gene_TRIDC6BG000050, gene_TRIDC6BG007380, gene_TRIDC7BG001810, gene_TRIDC7BG061610, gene_TRIDC7BG064400, gene_TRIDC7BG067780, gene_TRIDC7BG070220, gene_TRIDC7BG070340
Poaceae	Triticum aestivum	65	TraesCS1B02G093800.1, TraesCS1B02G348800.1 ... TraesCS1B02G451600.1, TraesCS1B02G451700.1, TraesCS1D02G077800.1, TraesCS1D02G271500.1, TraesCS2A02G023700.1, TraesCS2A02G023800.1, TraesCS2A02G023900.1, TraesCS2A02G024800.2, TraesCS2A02G024900.1, TraesCS2A02G039100.1, TraesCS2A02G465900.1, TraesCS2B02G026800.1, TraesCS2B02G027000.1, TraesCS2B02G033800.1, TraesCS2B02G034000.1, TraesCS2B02G034200.2, TraesCS2B02G034300.1, TraesCS2B02G034600.2, TraesCS2B02G035300.1, TraesCS2B02G036500.1, TraesCS2B02G036600.1, TraesCS2B02G036800.1, TraesCS2B02G552500.1, TraesCS2B02G576600.2, TraesCS2D02G019600.2, TraesCS2D02G024700.1, TraesCS2D02G024900.1, TraesCS2D02G025000.1, TraesCS2D02G025400.2, TraesCS2D02G026500.1, TraesCS2D02G057700.1, TraesCS2D02G068800.1, TraesCS3B02G005100.1, TraesCS3D02G439500.2, TraesCS4A02G026600.1, TraesCS4A02G484000.1, TraesCS4B02G301100.1, TraesCS4B02G343100.1, TraesCS5A02G413900.1, TraesCS5A02G433600.1, TraesCS5D02G005500.1, TraesCS5D02G017400.1, TraesCS5D02G422600.1, TraesCS5D02G502300.1, TraesCS5D02G539100.3, TraesCS6A02G041100.1, TraesCS6A02G041200.1, TraesCS6B02G004100.1, TraesCS6B02G008300.1, TraesCS6B02G044800.1, TraesCS6B02G056700.1, TraesCS6B02G057200.1, TraesCS6B02G057500.1, TraesCS6B02G057600.1, TraesCS7B02G407000.1, TraesCS7B02G445400.2, TraesCS7B02G446400.1, TraesCS7D02G000700.1, TraesCS7D02G487900.1, TraesCS7D02G503700.2, TraesCSU02G008100.1, TraesCSU02G008200.1, TraesCSU02G009400.1
Poaceae	Zea mays	1	Zm00001eb167140_P001
Poaceae	Zoysia japonica	3	nbis-gene-32046, nbis-gene-49063, nbis-gene-49776
Poaceae	Zoysia macrostachya	3	Zma_g13065, Zma_g13067, Zma_g28006