Basic Information
Locus ID:
Oco21G002200
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein of unknown function, DUF594
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG21 | 2002271 | 2004333 | + | Oco21G002200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 52,969.76 Da | 38.22 | 110.44 | 0.18 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015615966.1 | uncharacterized protein LOC107278558 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | I1QY28 | DUF4220 domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.443 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0671370 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0093960.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_046376, gene-QYE76_064692, gene-QYE76_064712 |
| Poaceae | Oryza coarctata | 2 | Oco21G002200, Oco21G008550 |
| Poaceae | Oryza sativa | 6 | LOC_Os10g31290.1, LOC_Os11g06990.1, LOC_Os11g40340.1 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G074800, gene-BS78_K288000, gene-BS78_K313600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702477 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr23G018960 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G662700, Tel7E01G209900 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC1AG063390, gene_TRIDC1AG063420 ... |
| Poaceae | Triticum aestivum | 16 | TraesCS1A02G401400.1, TraesCS1A02G432100.1 ... |