Basic Information
Locus ID:
Oco20G009440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 13378847 | 13382663 | + | Oco20G009440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 112,455.20 Da | 42.03 | 82.33 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 379 | 627 | 5.51663E-127 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 766 | 1029 | 5.0E-118 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 410 | 560 | 2.8E-32 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 398 | 547 | 1.98E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 378 | 628 | 3.4E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 289 | 1031 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 407 | 636 | 31.169664 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_040384090.1 | translocase of chloroplast 132, chloroplastic-like [Oryza brachyantha] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | J3N4N7 | AIG1-type G domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology