Basic Information
Locus ID:
Oco20G005890
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 10098013 | 10101736 | + | Oco20G005890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 63,062.69 Da | 46.37 | 66.12 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 111 | 478 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 116 | 414 | 7.3E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 433 | 477 | 3.2E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 462 | 3.78E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 111 | 196 | 6.3E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 197 | 261 | 6.3E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 432 | 8.1E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 443 | 8.1E-44 | - |
| SMART | SM00133 | pkinase_C_6 | 415 | 479 | 1.7E-6 | IPR000961 |
| SMART | SM00220 | serkin_6 | 113 | 414 | 6.3E-104 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 113 | 414 | 48.018158 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 415 | 487 | 13.811903 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 119 | 142 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_052133782.1 | uncharacterized protein LOC127752453 [Oryza glaberrima] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1F0B1 | Serine/threonine-protein kinase tricorner-like OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_032185 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology