Basic Information
Locus ID:
Oco20G004910
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 8938794 | 8942015 | - | Oco20G004910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 51,245.91 Da | 46.87 | 80.31 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 121 | 398 | 9.50519E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 120 | 393 | 9.3E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 395 | 2.56E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 201 | 409 | 1.4E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 95 | 200 | 4.8E-28 | - |
| SMART | SM00220 | serkin_6 | 115 | 399 | 2.9E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 115 | 399 | 43.594215 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 121 | 149 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 70 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03320.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_040384069.1 | serine/threonine-protein kinase PCRK1-like isoform X1 [Oryza brachyantha] | 0 |
| Q9LZF8 | Serine/threonine-protein kinase PCRK2 OS=Arabidopsis thaliana OX=3702 GN=PCRK2 PE=1 SV=1 | 0 | |
| TrEMBL | I1Q5W8 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology