HalophFGD

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Basic Information
Locus ID: Oco20G001500
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: Epidermal growth factor-like domain.
Maps and Mapping Data
Chromosome Start End Strand ID
LG20 2537828 2538610 - Oco20G001500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.67 22,226.37 Da 44.89 75.52 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015613995.2 wall-associated receptor kinase 1-like [Oryza sativa Japonica Group] 0
TrEMBL B8BFX9 GUB_WAK_bind domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32876 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH01.2581, AH03.451, AH05.917, AH08.1177, AH08.706, BH03.547 ...
BH03.1279, BH03.548, BH03.549, BH08.1147, CH03.1073, CH03.1438, CH08.1274
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.1HG0012140.1.CDS1 ...
HORVU.MOREX.r3.3HG0314070.1, HORVU.MOREX.r3.5HG0503880.1, HORVU.MOREX.r3.6HG0548400.1, HORVU.MOREX.r3.6HG0548410.1, HORVU.MOREX.r3.6HG0632750.1
Poaceae Lolium multiflorum 18 gene-QYE76_001012, gene-QYE76_004044, gene-QYE76_008427 ...
gene-QYE76_008653, gene-QYE76_008656, gene-QYE76_012929, gene-QYE76_016492, gene-QYE76_019328, gene-QYE76_019329, gene-QYE76_019331, gene-QYE76_019345, gene-QYE76_019348, gene-QYE76_019357, gene-QYE76_024744, gene-QYE76_024745, gene-QYE76_058469, gene-QYE76_058473, gene-QYE76_059559
Poaceae Oryza coarctata 2 Oco07G004170, Oco20G001500
Poaceae Oryza sativa 5 LOC_Os10g02720.1, LOC_Os10g09570.1, LOC_Os10g09620.1 ...
LOC_Os10g09690.1, LOC_Os10g09700.1
Poaceae Paspalum vaginatum 8 gene-BS78_05G024300, gene-BS78_05G024700, gene-BS78_K071100 ...
gene-BS78_05G039800, gene-BS78_05G182000, gene-BS78_08G013000, gene-BS78_08G013100, gene-BS78_K338100
Poaceae Puccinellia tenuiflora 9 Pt_Chr0106588, Pt_Chr0106613, Pt_Chr0500162, Pt_Chr0500822 ...
Pt_Chr0500824, Pt_Chr0505751, Pt_Chr0700233, Pt_Chr0700422, Pt_Chr0700614
Poaceae Sporobolus alterniflorus 6 Chr07G015030, Chr07G015050, Chr19G018710, Chr20G001700 ...
Chr29G002050, Chr31G007740
Poaceae Thinopyrum elongatum 19 Tel1E01G055300, Tel1E01G120300, Tel1E01G120400 ...
Tel3E01G149900, Tel5E01G701400, Tel5E01G702800, Tel5E01G706600, Tel6E01G008600, Tel6E01G153100, Tel6E01G761400, Tel6E01G761800, Tel6E01G762000, Tel6E01G762800, Tel7E01G001300, Tel7E01G004400, Tel7E01G005000, Tel7E01G052400, Tel7E01G054000, Telscf22901G000200
Poaceae Triticum dicoccoides 29 gene_TRIDC1AG001210, gene_TRIDC1BG000130 ...
gene_TRIDC1BG004720, gene_TRIDC1BG010000, gene_TRIDC2AG015970, gene_TRIDC2BG019290, gene_TRIDC2BG081600, gene_TRIDC2BG081610, gene_TRIDC3AG075490, gene_TRIDC3BG013760, gene_TRIDC3BG079810, gene_TRIDC3BG085960, gene_TRIDC4AG070430, gene_TRIDC5AG064190, gene_TRIDC5AG064200, gene_TRIDC5BG010460, gene_TRIDC5BG068770, gene_TRIDC5BG069010, gene_TRIDC5BG069430, gene_TRIDC6AG060300, gene_TRIDC6BG000280, gene_TRIDC6BG000320, gene_TRIDC6BG013160, gene_TRIDC6BG073080, gene_TRIDC6BG073130, gene_TRIDC7AG000010, gene_TRIDC7AG000080, gene_TRIDC7AG011990, gene_TRIDC7AG078190
Poaceae Triticum aestivum 52 TraesCS1A02G011900.1, TraesCS1A02G012000.1 ...
TraesCS1B02G004100.1, TraesCS1B02G032000.1.cds1, TraesCS1B02G043400.1, TraesCS1D02G005100.1, TraesCS1D02G010100.1, TraesCS2A02G129700.1, TraesCS2B02G151900.1, TraesCS2B02G563900.1, TraesCS2D02G002600.1, TraesCS3A02G533100.1, TraesCS3B02G098900.1, TraesCS3B02G595500.1, TraesCS3D02G083900.1, TraesCS4A02G448100.1, TraesCS5A02G445700.1, TraesCS5B02G043000.1, TraesCS5B02G452300.1, TraesCS5B02G454100.1, TraesCS5B02G454700.1, TraesCS5B02G455500.1, TraesCS5B02G458300.1, TraesCS6A02G061200.1, TraesCS6B02G003100.1.cds1, TraesCS6B02G055400.1, TraesCS6B02G095800.1, TraesCS6B02G460900.1, TraesCS6D02G000100.1.cds1, TraesCS6D02G001300.1, TraesCS6D02G010800.1, TraesCS6D02G063400.1, TraesCS6D02G069500.1, TraesCS6D02G395400.1, TraesCS6D02G395600.1, TraesCS6D02G395700.1, TraesCS6D02G395900.1, TraesCS7A02G000100.1, TraesCS7A02G062000.1, TraesCS7A02G103000.1, TraesCS7A02G565200.1, TraesCS7B02G074949.1, TraesCS7D02G545900.1, TraesCSU02G089200.1.cds1, TraesCSU02G156800.1, TraesCSU02G171400.1, TraesCSU02G178200.1.cds1, TraesCSU02G192000.1.cds1, TraesCSU02G211900.1, TraesCSU02G224100.1, TraesCSU02G230200.1.cds1, TraesCSU02G234200.1.cds1
Poaceae Zea mays 3 Zm00001eb172910_P001, Zm00001eb180130_P003 ...
Zm00001eb379780_P001
Poaceae Zoysia japonica 1 nbis-gene-49182
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