Basic Information
Locus ID:
Oco20G001240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 2100339 | 2103751 | - | Oco20G001240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.75 | 45,340.94 Da | 38.92 | 61.72 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 313 | 343 | 4.51818E-5 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 313 | 352 | 1.0E-6 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 41 | 96 | 6.2E-9 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 312 | 345 | 3.81E-7 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 252 | 358 | 1.1E-10 | - |
| SMART | SM00179 | egfca_6 | 313 | 355 | 8.3E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 264 | 312 | 17.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 316 | 355 | 0.68 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 329 | 340 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 313 | 338 | - | IPR018097 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_025809058.1 | wall-associated receptor kinase 2-like [Panicum hallii] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9XHZ5 | Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology