Basic Information
Locus ID:
Oco20G001080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 1727115 | 1727949 | - | Oco20G001080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 19,236.61 Da | 62.81 | 86.80 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 142 | 180 | 6.33E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 37 | 99 | 2.38E-7 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 135 | 180 | 4.6E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 28 | 107 | 1.4E-8 | - |
| SMART | SM00220 | serkin_6 | 41 | 181 | 0.0089 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 181 | 10.704398 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052168955.1 | putative cyclin-dependent kinase F-2 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0M5J7 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology