HalophFGD

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Basic Information
Locus ID: Oco20G000800
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
LG20 1248216 1251152 - Oco20G000800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.06 43,995.66 Da 52.60 84.17 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 22 62 8.1E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 21 141 1.7E-14 IPR036047
Gene3D G3DSA:1.20.1280.50 - 17 65 3.1E-9 -
SMART SM00256 fbox_2 23 65 9.4E-6 IPR001810
ProSiteProfiles PS50181 F-box domain profile. 17 65 10.159829 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_006662177.1 uncharacterized protein LOC102703066 [Oryza brachyantha] 0
TrEMBL A0A6G1EXG1 F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_019878 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00027636
Poaceae Echinochloa crus-galli 26 AH01.2562, AH01.2591, AH01.2597, AH05.2770, AH05.2771 ...
AH09.150, BH01.2897, BH01.2916, BH01.2925, BH03.3339, BH03.3340, BH05.2870, BH08.1494, BH08.1495, BH09.232, CH01.3090, CH01.3112, CH01.3122, CH01.3126, CH01.3141, CH03.3527, CH05.2913, CH07.936, CH09.203, CH09.208, CH09.2699
Poaceae Eleusine coracana subsp. coracana 39 gene-QOZ80_2AG0107940, gene-QOZ80_2AG0107950 ...
gene-QOZ80_2AG0107960, gene-QOZ80_2AG0107970, gene-QOZ80_2AG0118950, gene-QOZ80_2AG0118970, gene-QOZ80_2AG0119680, gene-QOZ80_2AG0119750, gene-QOZ80_2AG0119760, gene-QOZ80_2BG0161560, gene-QOZ80_2BG0161570, gene-QOZ80_2BG0161580, gene-QOZ80_2BG0161590, gene-QOZ80_2BG0161600, gene-QOZ80_2BG0161610, gene-QOZ80_2BG0172790, gene-QOZ80_2BG0173140, gene-QOZ80_2BG0173180, gene-QOZ80_4AG0327120, gene-QOZ80_4BG0359080, gene-QOZ80_5AG0375520, gene-QOZ80_5AG0376210, gene-QOZ80_5AG0376230, gene-QOZ80_5AG0376240, gene-QOZ80_5AG0376260, gene-QOZ80_5AG0382230, gene-QOZ80_5AG0382650, gene-QOZ80_5AG0390310, gene-QOZ80_5BG0422920, gene-QOZ80_5BG0423440, gene-QOZ80_5BG0423450, gene-QOZ80_5BG0423460, gene-QOZ80_5BG0423470, gene-QOZ80_5BG0423480, gene-QOZ80_5BG0429160, gene-QOZ80_5BG0438180, gene-QOZ80_7AG0561800, gene-QOZ80_7BG0595200, gene-QOZ80_8AG0628170
Poaceae Hordeum vulgare 25 HORVU.MOREX.r3.1HG0055250.1.CDS1 ...
HORVU.MOREX.r3.1HG0093820.1, HORVU.MOREX.r3.2HG0128260.1.CDS1, HORVU.MOREX.r3.3HG0229360.1.CDS1, HORVU.MOREX.r3.5HG0495310.1, HORVU.MOREX.r3.5HG0495320.1, HORVU.MOREX.r3.5HG0515390.1, HORVU.MOREX.r3.5HG0523120.1.CDS1, HORVU.MOREX.r3.6HG0540230.1, HORVU.MOREX.r3.6HG0540250.1.CDS1, HORVU.MOREX.r3.6HG0540280.1, HORVU.MOREX.r3.6HG0540390.2, HORVU.MOREX.r3.6HG0547490.1, HORVU.MOREX.r3.6HG0547550.1, HORVU.MOREX.r3.6HG0547690.1.CDS1, HORVU.MOREX.r3.6HG0547720.1, HORVU.MOREX.r3.6HG0548310.1.CDS1, HORVU.MOREX.r3.6HG0548510.1, HORVU.MOREX.r3.6HG0548530.1, HORVU.MOREX.r3.6HG0550310.1, HORVU.MOREX.r3.6HG0550450.1, HORVU.MOREX.r3.6HG0550570.1, HORVU.MOREX.r3.6HG0550700.1, HORVU.MOREX.r3.6HG0550740.1, HORVU.MOREX.r3.6HG0568860.1
Poaceae Lolium multiflorum 92 gene-QYE76_000752, gene-QYE76_000859, gene-QYE76_000860 ...
gene-QYE76_001240, gene-QYE76_003475, gene-QYE76_003977, gene-QYE76_005386, gene-QYE76_006557, gene-QYE76_006923, gene-QYE76_008909, gene-QYE76_010286, gene-QYE76_012399, gene-QYE76_012453, gene-QYE76_013502, gene-QYE76_019292, gene-QYE76_019294, gene-QYE76_019301, gene-QYE76_019420, gene-QYE76_019422, gene-QYE76_019423, gene-QYE76_019424, gene-QYE76_019645, gene-QYE76_019691, gene-QYE76_019693, gene-QYE76_019699, gene-QYE76_019712, gene-QYE76_019717, gene-QYE76_019718, gene-QYE76_019721, gene-QYE76_019728, gene-QYE76_019729, gene-QYE76_019730, gene-QYE76_019733, gene-QYE76_019735, gene-QYE76_019736, gene-QYE76_019737, gene-QYE76_019740, gene-QYE76_019743, gene-QYE76_020257, gene-QYE76_020603, gene-QYE76_020624, gene-QYE76_020725, gene-QYE76_021361, gene-QYE76_024521, gene-QYE76_025786, gene-QYE76_025800, gene-QYE76_027268, gene-QYE76_029345, gene-QYE76_035824, gene-QYE76_036699, gene-QYE76_039318, gene-QYE76_039755, gene-QYE76_039911, gene-QYE76_039917, gene-QYE76_043927, gene-QYE76_046998, gene-QYE76_049342, gene-QYE76_049346, gene-QYE76_049365, gene-QYE76_049422, gene-QYE76_049424, gene-QYE76_049425, gene-QYE76_049427, gene-QYE76_049430, gene-QYE76_049697, gene-QYE76_049715, gene-QYE76_049894, gene-QYE76_051216, gene-QYE76_051225, gene-QYE76_051226, gene-QYE76_051269, gene-QYE76_052014, gene-QYE76_052016, gene-QYE76_052017, gene-QYE76_052023, gene-QYE76_052029, gene-QYE76_052750, gene-QYE76_052751, gene-QYE76_054890, gene-QYE76_054891, gene-QYE76_054893, gene-QYE76_054894, gene-QYE76_054917, gene-QYE76_054920, gene-QYE76_055565, gene-QYE76_056687, gene-QYE76_056871, gene-QYE76_060038, gene-QYE76_062322, gene-QYE76_062325, gene-QYE76_063252, gene-QYE76_066332
Poaceae Oryza coarctata 15 Oco03G006820, Oco03G006830, Oco04G007110, Oco13G000770 ...
Oco14G010750, Oco14G012670, Oco19G000640, Oco19G000650, Oco19G000900, Oco20G000660, Oco20G000700, Oco20G000720, Oco20G000740, Oco20G000800, Oco20G001050
Poaceae Oryza sativa 23 LOC_Os02g15160.1, LOC_Os05g25580.1, LOC_Os10g04690.1 ...
LOC_Os10g04700.2, LOC_Os10g04750.1, LOC_Os10g04770.1, LOC_Os10g04780.1, LOC_Os10g04850.1, LOC_Os10g04950.1, LOC_Os10g04980.1, LOC_Os10g05000.1, LOC_Os10g05010.1, LOC_Os10g05200.1, LOC_Os10g05210.1, LOC_Os10g05240.1, LOC_Os10g05520.1, LOC_Os10g05530.1, LOC_Os10g05540.1, LOC_Os10g05590.1, LOC_Os10g06700.1, LOC_Os10g10980.1, LOC_Os11g06580.1, LOC_Os11g38840.1
Poaceae Paspalum vaginatum 22 gene-BS78_01G260300, gene-BS78_01G262200, gene-BS78_K013100 ...
gene-BS78_01G262800, gene-BS78_04G135300, gene-BS78_05G031300, gene-BS78_05G217400, gene-BS78_05G218100, gene-BS78_06G189900, gene-BS78_07G121200, gene-BS78_07G121300, gene-BS78_09G117300, gene-BS78_09G117600, gene-BS78_10G242600, gene-BS78_K169300, gene-BS78_K169400, gene-BS78_K169600, gene-BS78_K288200, gene-BS78_K288300, gene-BS78_K288400, gene-BS78_K288600, gene-BS78_K288700
Poaceae Puccinellia tenuiflora 48 Pt_Chr0104540, Pt_Chr0106656, Pt_Chr0200641, Pt_Chr0200881 ...
Pt_Chr0200895, Pt_Chr0200901, Pt_Chr0200962, Pt_Chr0201007, Pt_Chr0201016, Pt_Chr0201033, Pt_Chr0201036, Pt_Chr0201039, Pt_Chr0201040, Pt_Chr0201046, Pt_Chr0201047, Pt_Chr0201052, Pt_Chr0201053, Pt_Chr0201055, Pt_Chr0201056, Pt_Chr0201091, Pt_Chr0201176, Pt_Chr0202832, Pt_Chr0202835, Pt_Chr0202838, Pt_Chr0203214, Pt_Chr0205583, Pt_Chr0205584, Pt_Chr0205590, Pt_Chr0205677, Pt_Chr0205678, Pt_Chr0205680, Pt_Chr0206019, Pt_Chr0207040, Pt_Chr0207245, Pt_Chr0207254, Pt_Chr0207257, Pt_Chr0207260, Pt_Chr0207262, Pt_Chr0300256, Pt_Chr0306278, Pt_Chr0307507, Pt_Chr0601161, Pt_Chr0601174, Pt_Chr0601306, Pt_Chr0700541, Pt_Chr0704770, Pt_Chr0705000, Pt_Chr0705263
Poaceae Sporobolus alterniflorus 11 Chr01G021990, Chr02G022660, Chr04G022830, Chr05G013540 ...
Chr06G024620, Chr13G022370, Chr18G007030, Chr22G010300, Chr25G016010, Chr25G016020, Chr25G016030
Poaceae Thinopyrum elongatum 62 Tel1E01G353200, Tel1E01G728200, Tel2E01G1037700 ...
Tel3E01G026300, Tel3E01G028500, Tel3E01G028600, Tel3E01G119300, Tel3E01G119500, Tel3E01G120400, Tel3E01G136700, Tel3E01G136900, Tel3E01G565700, Tel3E01G702500, Tel3E01G702800, Tel3E01G704100, Tel3E01G913900, Tel5E01G108300, Tel5E01G108600, Tel5E01G650000, Tel6E01G033400, Tel6E01G034900, Tel6E01G035400, Tel6E01G042700, Tel6E01G102100, Tel6E01G136900, Tel6E01G137000, Tel6E01G137500, Tel6E01G139500, Tel6E01G139900, Tel6E01G142300, Tel6E01G143000, Tel6E01G143200, Tel6E01G144500, Tel6E01G147100, Tel6E01G147500, Tel6E01G152500, Tel6E01G154200, Tel6E01G154300, Tel6E01G154700, Tel6E01G155200, Tel6E01G155500, Tel6E01G155600, Tel6E01G155700, Tel6E01G157200, Tel6E01G169800, Tel6E01G170500, Tel6E01G170700, Tel6E01G171600, Tel6E01G174200, Tel6E01G176000, Tel6E01G176100, Tel6E01G176200, Tel6E01G176400, Tel6E01G178000, Tel6E01G178500, Tel6E01G179000, Tel6E01G179900, Tel6E01G752200, Tel6E01G752300, Tel7E01G174500, Tel7E01G854100, Telscf55701G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG030950, gene_TRIDC1AG045240 ...
gene_TRIDC1AG063250, gene_TRIDC1BG036420, gene_TRIDC1BG072540, gene_TRIDC2AG003470, gene_TRIDC2BG026970, gene_TRIDC3AG050840, gene_TRIDC3BG012610, gene_TRIDC3BG057250, gene_TRIDC3BG070590, gene_TRIDC4AG049780, gene_TRIDC5AG044160, gene_TRIDC5BG048100, gene_TRIDC5BG064490, gene_TRIDC6AG000820, gene_TRIDC6AG000900, gene_TRIDC6AG007830, gene_TRIDC6AG007870, gene_TRIDC6AG008020, gene_TRIDC6AG009290, gene_TRIDC6AG009490, gene_TRIDC6AG022290, gene_TRIDC6BG001370, gene_TRIDC6BG001560, gene_TRIDC6BG001650, gene_TRIDC6BG009920, gene_TRIDC6BG009930, gene_TRIDC6BG009970, gene_TRIDC6BG009990, gene_TRIDC6BG010110, gene_TRIDC6BG011200, gene_TRIDC6BG011500, gene_TRIDC6BG014220
Poaceae Triticum aestivum 210 TraesCS1A02G063400.1, TraesCS1A02G205000.1.cds1 ...
TraesCS1A02G283700.2, TraesCS1A02G431000.1, TraesCS1B02G218600.1.cds1, TraesCS1B02G292900.2, TraesCS1B02G465800.1, TraesCS1D02G208300.1.cds1, TraesCS1D02G282800.1, TraesCS1D02G440200.1, TraesCS2A02G032900.1.cds1, TraesCS2A02G083800.1, TraesCS2A02G180500.2, TraesCS2A02G181100.1, TraesCS2B02G098000.1, TraesCS2B02G098300.1, TraesCS2B02G206600.1, TraesCS2B02G207300.1, TraesCS2B02G207700.1, TraesCS2D02G081800.1.cds1, TraesCS2D02G114000.1.cds1, TraesCS2D02G188900.1, TraesCS2D02G189000.1, TraesCS3A02G015700.1.cds1, TraesCS3A02G015900.1.cds1, TraesCS3A02G063100.1.cds1, TraesCS3A02G063500.1.cds1, TraesCS3A02G064000.1.cds1, TraesCS3A02G064200.1, TraesCS3A02G075300.1, TraesCS3A02G353100.1, TraesCS3A02G445100.1, TraesCS3A02G445700.1, TraesCS3A02G445800.1, TraesCS3A02G446100.1, TraesCS3B02G075200.1, TraesCS3B02G075400.1, TraesCS3B02G076200.1.cds1, TraesCS3B02G076400.1, TraesCS3B02G076500.1, TraesCS3B02G076600.1, TraesCS3B02G076700.1, TraesCS3B02G076800.1, TraesCS3B02G089200.2, TraesCS3B02G385800.1, TraesCS3B02G479700.1, TraesCS3B02G479800.1, TraesCS3B02G480400.1.cds1, TraesCS3B02G480500.1, TraesCS3B02G480600.1, TraesCS3B02G480700.1.cds1, TraesCS3B02G481200.1, TraesCS3D02G013100.1, TraesCS3D02G013200.1.cds1, TraesCS3D02G062800.1.cds1, TraesCS3D02G063200.1.cds1, TraesCS3D02G063500.1, TraesCS3D02G063900.1, TraesCS3D02G064600.1, TraesCS3D02G075300.1, TraesCS3D02G347200.1, TraesCS3D02G437700.1, TraesCS3D02G437800.1, TraesCS3D02G437900.1, TraesCS4A02G309100.1, TraesCS4B02G004100.1, TraesCS4D02G005200.1, TraesCS5B02G052200.1, TraesCS5B02G294300.1, TraesCS5B02G544300.1, TraesCS5D02G057900.1, TraesCS5D02G058300.1, TraesCS5D02G302500.1.cds1, TraesCS6A02G006600.1, TraesCS6A02G006700.1.cds1, TraesCS6A02G006800.1, TraesCS6A02G007500.1, TraesCS6A02G007600.1, TraesCS6A02G007700.2, TraesCS6A02G008200.1, TraesCS6A02G027100.1, TraesCS6A02G039700.1, TraesCS6A02G054300.1, TraesCS6A02G057000.1, TraesCS6A02G057500.1, TraesCS6A02G057600.1, TraesCS6A02G057800.1, TraesCS6A02G058100.1, TraesCS6A02G061800.1, TraesCS6A02G062100.1, TraesCS6A02G062200.1, TraesCS6A02G062500.1, TraesCS6A02G063700.1, TraesCS6A02G064000.1, TraesCS6A02G072900.1.cds1, TraesCS6A02G073100.1.cds1, TraesCS6A02G073200.1.cds1, TraesCS6A02G073500.1, TraesCS6A02G075600.1, TraesCS6A02G075800.1.cds1, TraesCS6A02G076400.2, TraesCS6A02G077100.1, TraesCS6A02G077200.1.cds1, TraesCS6A02G307000.1.cds1, TraesCS6A02G408500.1, TraesCS6B02G012600.1, TraesCS6B02G013700.9, TraesCS6B02G014100.1, TraesCS6B02G067400.1, TraesCS6B02G067900.1.cds1, TraesCS6B02G074400.1, TraesCS6B02G074500.2, TraesCS6B02G074600.1, TraesCS6B02G074700.1, TraesCS6B02G074900.1, TraesCS6B02G075000.1, TraesCS6B02G075400.1, TraesCS6B02G077700.1, TraesCS6B02G083000.3, TraesCS6B02G083300.1, TraesCS6B02G083400.1, TraesCS6B02G083600.1, TraesCS6B02G083700.1.cds1, TraesCS6B02G083800.1, TraesCS6B02G084600.1, TraesCS6B02G085300.2, TraesCS6B02G086000.1, TraesCS6B02G087900.1, TraesCS6B02G098000.1.cds1, TraesCS6B02G098100.1, TraesCS6B02G098200.1, TraesCS6B02G098500.1.cds1, TraesCS6B02G098600.1, TraesCS6B02G100500.1, TraesCS6B02G100600.1, TraesCS6B02G100900.1.cds1, TraesCS6B02G101100.1.cds1, TraesCS6B02G101200.1, TraesCS6B02G101600.1, TraesCS6B02G102400.1, TraesCS6B02G103100.1, TraesCS6B02G103400.1.cds1, TraesCS6B02G103600.1, TraesCS6B02G103700.1.cds1, TraesCS6B02G377900.1, TraesCS6B02G454700.1.cds1, TraesCS6D02G010000.1, TraesCS6D02G011000.1, TraesCS6D02G011800.1, TraesCS6D02G012000.1, TraesCS6D02G012800.1, TraesCS6D02G030900.1, TraesCS6D02G055700.1.cds1, TraesCS6D02G056400.1.cds1, TraesCS6D02G057500.1, TraesCS6D02G058000.1, TraesCS6D02G058100.1.cds1, TraesCS6D02G058400.1.cds1, TraesCS6D02G058500.1, TraesCS6D02G058800.1, TraesCS6D02G059000.1, TraesCS6D02G060800.1, TraesCS6D02G061100.1, TraesCS6D02G062400.1, TraesCS6D02G062600.1, TraesCS6D02G063500.1, TraesCS6D02G070700.1, TraesCS6D02G070800.2, TraesCS6D02G071300.1, TraesCS6D02G071500.1, TraesCS6D02G071900.1, TraesCS6D02G364000.1.cds1, TraesCS6D02G392400.1.cds1, TraesCS7A02G565300.1.cds1, TraesCS7A02G567100.1, TraesCS7B02G041300.1, TraesCS7B02G303500.1, TraesCS7B02G494400.1, TraesCS7B02G494800.1.cds1, TraesCS7B02G497800.1.cds1, TraesCS7B02G498200.1.cds1, TraesCS7B02G498500.1.cds1, TraesCS7D02G077500.1, TraesCS7D02G141000.1, TraesCS7D02G544400.1, TraesCSU02G025900.1, TraesCSU02G026300.1, TraesCSU02G026700.1, TraesCSU02G026900.1.cds1, TraesCSU02G027000.1, TraesCSU02G027500.1, TraesCSU02G027800.2, TraesCSU02G028000.1, TraesCSU02G028800.1, TraesCSU02G029200.1.cds1, TraesCSU02G056500.1.cds1, TraesCSU02G066800.1, TraesCSU02G066900.1, TraesCSU02G078500.1, TraesCSU02G110000.1, TraesCSU02G118200.1, TraesCSU02G119000.1, TraesCSU02G119100.1, TraesCSU02G120400.1, TraesCSU02G133400.1.cds1, TraesCSU02G133500.1.cds1, TraesCSU02G133800.1, TraesCSU02G141700.1, TraesCSU02G193700.1, TraesCSU02G235100.1.cds1
Poaceae Zea mays 2 Zm00001eb285670_P001, Zm00001eb346560_P001
Poaceae Zoysia japonica 5 nbis-gene-34195, nbis-gene-39366, nbis-gene-42294 ...
nbis-gene-43021, nbis-gene-43033
Poaceae Zoysia macrostachya 5 Zma_g13023, Zma_g13062, Zma_g15396, Zma_g15832, Zma_g19281
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.