Basic Information
Locus ID:
Oco20G000090
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 240493 | 245632 | - | Oco20G000090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 83,628.78 Da | 44.63 | 80.72 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 308 | 342 | 1.31311E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 26 | 82 | 1.4E-9 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 424 | 683 | 2.3E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 403 | 688 | 1.78E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 308 | 346 | 2.66E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 267 | 310 | 3.5E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 396 | 496 | 1.0E-24 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 311 | 349 | 1.0E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 700 | 5.8E-46 | - |
| SMART | SM00179 | egfca_6 | 308 | 354 | 4.0E-7 | IPR001881 |
| SMART | SM00220 | serkin_6 | 421 | 688 | 9.5E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 689 | 33.347065 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 541 | 553 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 308 | 335 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 449 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_052134733.1 | wall-associated receptor kinase 2-like [Oryza glaberrima] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0EVX4 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology