Basic Information
Locus ID:
Oco20G000080
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phytosulfokine precursor protein (PSK)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG20 | 193012 | 194147 | - | Oco20G000080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 14,221.05 Da | 56.84 | 68.67 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 15 | 128 | 3.7E-14 | IPR009438 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22860.1 | phytosulfokine 2 precursor. Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor. | 0 |
| RefSeq | XP_002465610.1 | phytosulfokines 4 [Sorghum bicolor] | 0 |
| TrEMBL | A0A0E0M4X4 | Phytosulfokine OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology