Basic Information
Locus ID:
Oco19G003350
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG19 | 8061791 | 8068307 | - | Oco19G003350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 67,812.12 Da | 40.10 | 87.53 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 172 | 231 | 4.9E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 467 | 604 | 3.7E-18 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 80 | 120 | 1.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 292 | 1.19E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 449 | 607 | 6.18E-36 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 78 | 309 | 9.9E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 431 | 542 | 3.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 544 | 610 | 9.7E-14 | - |
| SMART | SM00369 | LRR_typ_2 | 242 | 264 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 6.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 241 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 171 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 465 | 615 | 20.697136 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_006661732.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Oryza brachyantha] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1BZH2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_017753 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology