Basic Information
Locus ID:
Oco19G002830
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG19 | 7215349 | 7220186 | + | Oco19G002830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 79,993.81 Da | 45.19 | 86.34 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 377 | 675 | 9.17649E-121 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 337 | 661 | 8.2E-90 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 377 | 686 | 6.19E-66 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 379 | 680 | 1.6E-39 | IPR029044 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.1 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_015614956.1 | probable galacturonosyltransferase 3 isoform X2 [Oryza sativa Japonica Group] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 0 | |
| TrEMBL | Q339E2 | Hexosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g21890 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology