Basic Information
Locus ID:
Oco19G001010
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG19 | 1835040 | 1850037 | - | Oco19G001010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 104,997.03 Da | 46.46 | 82.21 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 753 | 907 | 1.67705E-59 | - |
| Pfam | PF06337 | DUSP domain | 41 | 138 | 7.5E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 313 | 906 | 3.3E-85 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 138 | 6.93E-28 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 310 | 908 | 5.3E-111 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 298 | 510 | 5.9E-67 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 238 | 1.0E-11 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 13 | 150 | 2.3E-33 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 702 | 916 | 1.3E-57 | - |
| SMART | SM00695 | dusp | 37 | 140 | 3.9E-22 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 312 | 909 | 57.999325 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 19.246944 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 851 | 868 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 313 | 328 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_015614374.1 | ubiquitin carboxyl-terminal hydrolase 9 [Oryza sativa Japonica Group] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0EW13 | Ubiquitin carboxyl-terminal hydrolase OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology