Basic Information
Locus ID:
Oco19G000620
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG19 | 1084688 | 1093512 | + | Oco19G000620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 65,481.71 Da | 43.77 | 85.64 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 214 | 478 | 3.79662E-95 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 25 | 110 | 7.5E-12 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 209 | 478 | 1.6E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 190 | 502 | 1.32E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 18 | 114 | 2.5E-17 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 282 | 489 | 2.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 182 | 281 | 1.9E-36 | - |
| SMART | SM00220 | serkin_6 | 206 | 483 | 4.3E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 9 | 114 | 16.045298 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 206 | 493 | 37.092575 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 327 | 339 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 590 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_040384151.1 | cysteine-rich receptor-like protein kinase 15 [Oryza brachyantha] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | J3N0T0 | Cysteine-rich receptor-like protein kinase 25 OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology