Basic Information
Locus ID:
Oco18G012020
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 15835408 | 15842739 | - | Oco18G012020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 82,301.95 Da | 47.71 | 85.11 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 482 | 730 | 2.93695E-130 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 120 | 323 | 6.0E-72 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 477 | 730 | 8.6E-71 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 730 | 2.0E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 469 | 554 | 5.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 555 | 739 | 1.7E-63 | - |
| SMART | SM00220 | serkin_6 | 476 | 734 | 1.6E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 476 | 734 | 45.968727 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 482 | 503 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 597 | 609 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 701 | 723 | 1.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 657 | 679 | 1.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 550 | 563 | 1.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 638 | 648 | 1.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 591 | 609 | 1.1E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_040383430.1 | serine/threonine-protein kinase CTR1-like [Oryza brachyantha] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DGK1 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_011176 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology