Basic Information
Locus ID:
Oco18G011670
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 15593750 | 15598123 | + | Oco18G011670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 77,185.00 Da | 51.13 | 78.90 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 414 | 679 | 1.1E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 153 | 213 | 3.1E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 63 | 105 | 1.0E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 95 | 274 | 5.1E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 680 | 1.07E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 65 | 215 | 1.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 216 | 284 | 2.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 489 | 4.4E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 701 | 2.9E-53 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 681 | 33.997231 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 226 | 248 | 7.365424 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 397 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_015651443.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D0D8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_008840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology