Basic Information
Locus ID:
Oco18G011240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 15230032 | 15233479 | - | Oco18G011240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 47,119.51 Da | 33.55 | 82.07 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 34 | 420 | 6.29714E-173 | - |
| Pfam | PF00069 | Protein kinase domain | 259 | 420 | 1.9E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 45 | 185 | 1.5E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 421 | 1.25E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 420 | 1.3E-116 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 30 | 129 | 1.3E-116 | - |
| SMART | SM00220 | serkin_6 | 44 | 420 | 8.0E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 420 | 33.403603 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006661515.1 | SRSF protein kinase 1 [Oryza brachyantha] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1D0C2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_008875 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology