Basic Information
Locus ID:
Oco18G010200
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Glycosyl transferase family 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 14278007 | 14285471 | - | Oco18G010200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 137,266.23 Da | 46.40 | 82.89 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 379 | 654 | 1.21123E-106 | - |
| CDD | cd14066 | STKc_IRAK | 911 | 1181 | 4.00069E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 906 | 1179 | 4.2E-38 | IPR000719 |
| Pfam | PF01501 | Glycosyl transferase family 8 | 348 | 655 | 1.6E-88 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 379 | 655 | 1.1E-57 | IPR029044 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 882 | 1182 | 1.78E-72 | IPR011009 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 309 | 665 | 6.6E-37 | IPR029044 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 981 | 1185 | 1.9E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 866 | 979 | 2.7E-27 | - |
| SMART | SM00220 | serkin_6 | 905 | 1183 | 4.3E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 905 | 1183 | 34.110302 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 911 | 933 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1032 | 1044 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1186 | 1200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1186 | 1213 | - | - |
| Coils | Coil | Coil | 160 | 187 | - | - |
| Coils | Coil | Coil | 310 | 330 | - | - |
| Coils | Coil | Coil | 251 | 278 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_006660882.1 | polygalacturonate 4-alpha-galacturonosyltransferase-like [Oryza brachyantha] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0EU61 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology