Basic Information
Locus ID:
Oco18G008360
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAD dependent epimerase/dehydratase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 12655560 | 12658728 | - | Oco18G008360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 72,979.56 Da | 44.30 | 81.83 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08958 | FR_SDR_e | 354 | 638 | 1.56298E-130 | - |
| Pfam | PF01370 | NAD dependent epimerase/dehydratase family | 354 | 584 | 6.5E-20 | IPR001509 |
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 17 | 197 | 2.3E-69 | IPR004854 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 346 | 655 | 7.3E-58 | IPR036291 |
| Gene3D | G3DSA:3.10.330.10 | - | 122 | 195 | 1.9E-32 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 343 | 663 | 2.5E-104 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 7 | 120 | 5.7E-35 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 307 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35420.1 | dihydroflavonol 4-reductase-like1. Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production. | 0 |
| RefSeq | XP_015696665.1 | tetraketide alpha-pyrone reductase 1-like [Oryza brachyantha] | 0 |
| Q500U8 | Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana OX=3702 GN=TKPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0ILN1 | Epimerase domain-containing protein OS=Oryza nivara OX=4536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology