Basic Information
Locus ID:
Oco18G007520
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 11837158 | 11841988 | - | Oco18G007520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 89,351.94 Da | 44.51 | 78.05 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 91 | 287 | 5.98472E-96 | - |
| Pfam | PF00183 | Hsp90 protein | 269 | 765 | 1.4E-193 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 105 | 264 | 3.2E-12 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 82 | 297 | 4.06E-60 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 620 | 741 | 9.68E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 340 | 598 | 7.13E-90 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 598 | 745 | 2.2E-52 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 511 | 597 | 3.3E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 338 | 510 | 1.3E-74 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 67 | 312 | 1.3E-87 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 104 | 266 | 2.2E-8 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 59 | 784 | 1.0E-237 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 102 | 111 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 273 | 291 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 254 | 271 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 199 | 221 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 103 | 125 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 152 | 169 | 4.7E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 82 | 102 | 4.7E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 79 | 742 | 25.997942 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 769 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_015612552.1 | heat shock protein 90-5, chloroplastic [Oryza sativa Japonica Group] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0M2E4 | HATPase_c domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology