Basic Information
Locus ID:
Oco18G006200
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the AAA ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 10479410 | 10480783 | + | Oco18G006200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 46,961.25 Da | 45.11 | 86.83 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 90 | 384 | 1.4E-61 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 388 | 2.7E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 180 | 2.2E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 181 | 403 | 1.1E-61 | - |
| SMART | SM00220 | serkin_6 | 89 | 384 | 2.9E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 89 | 384 | 44.527058 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 210 | 222 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052166918.1 | uncharacterized protein LOC127783795 [Oryza glaberrima] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6G1DU80 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_038724 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology