HalophFGD

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Basic Information
Locus ID: Oco18G004340
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: Inactive receptor kinase
Maps and Mapping Data
Chromosome Start End Strand ID
LG18 8258659 8259341 - Oco18G004340
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.77 23,062.94 Da 40.19 103.85 0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52058 L domain-like 68 207 2.61E-27 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 66 219 2.6E-34 IPR032675
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034579593.1 probable inactive receptor kinase At1g48480 [Setaria viridis] 0
TrEMBL A0A0E0ERY9 Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH08.1596, BH08.1364, CH08.1788
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_6AG0534630, gene-QOZ80_6BG0487820 ...
gene-QOZ80_8AG0631340, gene-QOZ80_8BG0660280
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0479040.1.CDS1 ...
HORVU.MOREX.r3.7HG0672430.1
Poaceae Lolium multiflorum 3 gene-QYE76_004997, gene-QYE76_018052, gene-QYE76_031967
Poaceae Oryza coarctata 4 Oco15G008650, Oco17G004370, Oco18G004330, Oco18G004340
Poaceae Oryza sativa 4 LOC_Os06g07590.1, LOC_Os08g33090.1, LOC_Os09g23570.1 ...
LOC_Os11g06540.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G177300, gene-BS78_07G139800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0403242, Pt_Chr0702281
Poaceae Sporobolus alterniflorus 5 Chr10G010480, Chr11G011870, Chr17G013590, Chr20G005860 ...
Chr29G005620
Poaceae Thinopyrum elongatum 2 Tel5E01G341500, Tel7E01G388200
Poaceae Triticum dicoccoides 4 gene_TRIDC5AG033120, gene_TRIDC5BG034800 ...
gene_TRIDC7AG027070, gene_TRIDC7BG017590
Poaceae Triticum aestivum 6 TraesCS5A02G205500.1.cds1, TraesCS5B02G202900.1.cds1 ...
TraesCS5D02G210800.1.cds1, TraesCS7A02G214300.1, TraesCS7B02G121600.1, TraesCS7D02G216400.1
Poaceae Zea mays 3 Zm00001eb041870_P001, Zm00001eb179320_P001 ...
Zm00001eb312100_P001
Poaceae Zoysia japonica 4 nbis-gene-16959, nbis-gene-19993, nbis-gene-30896 ...
nbis-gene-45124
Poaceae Zoysia macrostachya 4 Zma_g23013, Zma_g24081, Zma_g30281, Zma_g32444
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.