Basic Information
Locus ID:
Oco18G002890
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 6445642 | 6451871 | + | Oco18G002890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 19,805.35 Da | 49.84 | 79.71 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 13 | 139 | 4.7E-31 | IPR021720 |
| Gene3D | G3DSA:2.60.120.430 | - | 2 | 145 | 9.0E-29 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07650.4 | - | 0 |
| RefSeq | XP_025876271.1 | probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X4 [Oryza sativa Japonica Group] | 0 |
| C0LGE0 | Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1 | 0 | |
| TrEMBL | Q6EQG8 | Os09g0345300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0345300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19151, jg24283 |
| Brassicaceae | Brassica nigra | 1 | BniB08g059010.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0910, Ceq04G0500 |
| Poaceae | Echinochloa crus-galli | 1 | CH08.1473 |
| Poaceae | Oryza coarctata | 1 | Oco18G002890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.130 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11097, nbisL1-mrna-24160 |
| Rhizophoraceae | Rhizophora mangle | 8 | nbisL1-mrna-15312, nbisL1-mrna-15313, nbisL1-mrna-15314 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu26044 |