Basic Information
Locus ID:
Oco18G001830
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 4889248 | 4893894 | - | Oco18G001830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 129,161.91 Da | 32.81 | 101.47 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 913 | 1181 | 3.3E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 75 | 6.9E-11 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 177 | 194 | 0.11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 301 | 314 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 694 | 749 | 1.9E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 403 | 464 | 3.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 328 | 388 | 1.9E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 677 | 804 | 2.38E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 892 | 1183 | 4.1E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 415 | 1.8E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 318 | 615 | 5.57E-58 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 629 | 686 | 3.4E-278 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 806 | 3.4E-278 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 173 | 1.0E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 987 | 1199 | 7.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 873 | 986 | 1.2E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 326 | 350 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 736 | 760 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 572 | 596 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 712 | 735 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 132 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 911 | 1183 | 5.4E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 451 | 475 | 88.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 911 | 1195 | 38.633183 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 402 | 423 | 7.44243 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 917 | 940 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1033 | 1045 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_006660505.2 | brassinosteroid LRR receptor kinase BRL1 [Oryza brachyantha] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0B0Y3 | non-specific serine/threonine protein kinase OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology