Basic Information
Locus ID:
Oco18G000930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 2852772 | 2854130 | + | Oco18G000930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 49,685.07 Da | 44.27 | 89.67 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 133 | 404 | 1.58009E-102 | - |
| Pfam | PF00069 | Protein kinase domain | 132 | 396 | 1.1E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 110 | 421 | 1.35E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 98 | 202 | 2.1E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 407 | 2.4E-62 | - |
| SMART | SM00220 | serkin_6 | 127 | 402 | 1.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 408 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 156 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015611020.1 | probable L-type lectin-domain containing receptor kinase S.7 [Oryza sativa Japonica Group] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DHT1 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0469840.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_004134, gene-QYE76_004163 |
| Poaceae | Oryza coarctata | 1 | Oco18G000930 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g07730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G079500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0705076, Pt_Chr0705098 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr10G003770, Chr11G015160 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G286600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG027700, gene_TRIDC5BG029160 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G168800.1.cds1, TraesCS5B02G165600.1.cds1 ... |