Basic Information
Locus ID:
Oco18G000850
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG18 | 2527299 | 2527966 | + | Oco18G000850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.99 | 18,232.78 Da | 63.72 | 81.27 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004954286.1 | uncharacterized protein LOC101776941 [Setaria italica] | 0 |
| TrEMBL | A0A0D9XBK7 | DUF295 domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH08.1207, BH07.3679, BH08.1175, CH07.3752, CH08.1300 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0469780.1 |
| Poaceae | Oryza coarctata | 2 | Oco18G000850, Oco19G001450 |
| Poaceae | Oryza sativa | 3 | LOC_Os06g16730.1, LOC_Os10g10390.1, LOC_Os10g10410.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G059500, gene-BS78_07G060200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0705290 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G282900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG027470 |
| Poaceae | Triticum aestivum | 1 | TraesCS5A02G166500.1.cds1 |