Basic Information
Locus ID:
Oco17G012050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 16853193 | 16860086 | - | Oco17G012050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 83,821.76 Da | 49.08 | 86.50 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 497 | 745 | 7.55006E-129 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 492 | 745 | 3.2E-70 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 126 | 329 | 9.1E-73 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 745 | 1.08E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 484 | 569 | 3.1E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 754 | 3.1E-62 | - |
| SMART | SM00220 | serkin_6 | 491 | 749 | 1.0E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 491 | 749 | 45.276161 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 497 | 518 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 612 | 624 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 606 | 624 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 672 | 694 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 565 | 578 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 716 | 738 | 9.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 653 | 663 | 9.5E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_052166725.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Oryza glaberrima] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | Q650V1 | Putative serine/threonine-specific protein kinase OS=Oryza sativa subsp. japonica OX=39947 GN=OJ1155_H10.17 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology