Basic Information
Locus ID:
Oco17G011790
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 16594347 | 16599362 | + | Oco17G011790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 73,547.03 Da | 50.10 | 82.76 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 383 | 647 | 3.2E-35 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 72 | 9.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 180 | 1.0E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 248 | 2.72E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 647 | 1.33E-66 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 260 | 8.5E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 342 | 456 | 1.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 668 | 1.0E-51 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 193 | 215 | 7.365424 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 381 | 655 | 32.569698 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 267 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_015651443.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | B9G516 | Protein kinase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_30326 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology