Basic Information
Locus ID:
Oco17G010840
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 15756588 | 15758918 | - | Oco17G010840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 52,298.02 Da | 53.13 | 96.19 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 43 | 466 | 4.8E-136 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 54 | 441 | 3.6E-104 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 49 | 467 | 1.2E-127 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 10 | 473 | 4.3E-166 | IPR002554 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03470.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa. | 0 |
| RefSeq | XP_040383649.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like [Oryza brachyantha] | 0 |
| O04375 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform OS=Arabidopsis thaliana OX=3702 GN=B'ALPHA PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DD44 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_004713 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology