Basic Information
Locus ID:
Oco17G009820
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
BAG domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 14809529 | 14811774 | - | Oco17G009820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 36,017.85 Da | 52.92 | 73.02 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02179 | BAG domain | 160 | 235 | 2.7E-11 | IPR003103 |
| Pfam | PF00240 | Ubiquitin family | 66 | 133 | 3.9E-6 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 52 | 139 | 1.42E-16 | IPR029071 |
| SUPERFAMILY | SSF63491 | BAG domain | 119 | 240 | 8.77E-21 | IPR036533 |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 136 | 241 | 2.2E-34 | IPR036533 |
| Gene3D | G3DSA:3.10.20.90 | - | 65 | 135 | 1.2E-20 | - |
| SMART | SM00264 | BAG_1 | 159 | 237 | 0.0016 | IPR003103 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 159 | 237 | 9.851536 | IPR003103 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 66 | 134 | 9.961455 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 324 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52060.1 | BCL-2-associated athanogene 1. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_052168603.1 | BAG family molecular chaperone regulator 1-like [Oryza glaberrima] | 0 |
| Q0WUQ1 | BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 | 0 | |
| TrEMBL | A6MD01 | BAG domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology