Basic Information
Locus ID:
Oco17G008570
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 13733752 | 13740841 | + | Oco17G008570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 119,866.93 Da | 44.30 | 77.61 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 514 | 855 | 3.04846E-97 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 519 | 846 | 1.5E-14 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 491 | 878 | 1.73E-57 | IPR036691 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 127 | 493 | 9.02E-21 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 70 | 495 | 8.5E-15 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 496 | 887 | 3.6E-99 | IPR036691 |
| SMART | SM00320 | WD40_4 | 193 | 232 | 95.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 512 | 861 | 3.3E-84 | IPR000300 |
| SMART | SM00320 | WD40_4 | 370 | 408 | 56.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 115 | 156 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 410 | 447 | 8.3 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1040 | 1081 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1062 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_006661398.2 | type I inositol polyphosphate 5-phosphatase 13-like [Oryza brachyantha] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0E0M2Z9 | IPPc domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology