Basic Information
Locus ID:
Oco17G007490
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 12688828 | 12698706 | + | Oco17G007490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 78,401.49 Da | 39.52 | 84.62 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01501 | Glycosyl transferase family 8 | 318 | 654 | 2.7E-62 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 348 | 685 | 6.75E-42 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 351 | 676 | 3.5E-25 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 200 | - | - |
| Coils | Coil | Coil | 280 | 300 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_052168737.1 | probable galacturonosyltransferase 4 [Oryza glaberrima] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0M2K0 | Hexosyltransferase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology