Basic Information
Locus ID:
Oco17G007280
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 12479070 | 12483929 | - | Oco17G007280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 89,319.99 Da | 45.39 | 79.31 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 92 | 288 | 9.14437E-97 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 106 | 265 | 5.4E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 270 | 750 | 1.4E-193 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 742 | 3.27E-33 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 83 | 298 | 5.11E-61 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 599 | 5.61E-88 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 511 | 3.8E-73 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 599 | 746 | 4.0E-53 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 68 | 313 | 2.5E-88 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 512 | 598 | 1.4E-31 | - |
| SMART | SM00387 | HKATPase_4 | 105 | 267 | 1.5E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 61 | 777 | 2.2E-236 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 103 | 112 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 126 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 153 | 170 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 171 | 188 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 274 | 292 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 255 | 272 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 200 | 222 | 2.0E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 83 | 103 | 2.0E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 80 | 743 | 25.891447 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 323 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_052168431.1 | heat shock protein 90-5, chloroplastic-like [Oryza glaberrima] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0M2E4 | HATPase_c domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology