Basic Information
Locus ID:
Oco17G005240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
MGD1
Description:
Monogalactosyldiacylglycerol (MGDG) synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 9846635 | 9852536 | - | Oco17G005240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 49,674.95 Da | 40.43 | 86.88 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 69 | 446 | 5.30681E-147 | - |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 308 | 423 | 7.1E-10 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 80 | 248 | 1.7E-60 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 67 | 444 | 1.17E-31 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 258 | 429 | 3.3E-28 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31780.2 | monogalactosyl diacylglycerol synthase 1. Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. | 0 |
| RefSeq | XP_052167342.1 | probable monogalactosyldiacylglycerol synthase 1, chloroplastic [Oryza glaberrima] | 0 |
| Q69QJ7 | Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MGD1 PE=2 SV=1 | 0 | |
| TrEMBL | I1QP16 | monogalactosyldiacylglycerol synthase OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology