Basic Information
Locus ID:
Oco17G004440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 8700223 | 8708041 | - | Oco17G004440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 179,773.44 Da | 47.62 | 77.65 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1338 | 1601 | 1.82398E-149 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 258 | 526 | 2.24916E-129 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1377 | 1544 | 2.9E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 278 | 516 | 2.1E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1545 | 1599 | 3.3E-7 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 323 | 492 | 7.06E-37 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1324 | 1601 | 6.54E-80 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1283 | 1458 | 4.3E-38 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 322 | 492 | 8.7E-49 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1459 | 1602 | 2.0E-41 | - |
| SMART | SM00330 | PIPK_2 | 1315 | 1602 | 1.2E-116 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1280 | 1601 | 59.190392 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 566 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 559 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_052167486.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Oryza glaberrima] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0M102 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology