Basic Information
Locus ID:
Oco17G004370
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 8590530 | 8592913 | - | Oco17G004370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 67,253.14 Da | 49.61 | 96.98 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 3.9E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 363 | 611 | 1.0E-24 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 146 | 167 | 0.62 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 363 | 619 | 5.33E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 214 | 6.43E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 631 | 1.2E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 433 | 1.3E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 222 | 2.4E-39 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 618 | 23.227121 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 334 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_052167355.1 | probable inactive receptor kinase RLK902 [Oryza glaberrima] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DS12 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_037478 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology