Basic Information
Locus ID:
Oco17G003210
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 7165550 | 7166399 | - | Oco17G003210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 10,125.39 Da | 65.50 | 73.48 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052166806.1 | uncharacterized protein LOC127783652 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0D3H5Y4 | F-box domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_06G000170 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103695921, gene-LOC120108684, gene-LOC120110423 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g00760 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g14050 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1685, BH03.1838, CH03.2019 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0533190 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0475180.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_004593, gene-QYE76_004708 |
| Poaceae | Oryza coarctata | 2 | Oco17G003210, Oco18G003130 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G162500 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0702523, Pt_Chr0702531 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G320700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG032370 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G193600.1, TraesCS5B02G188900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb310820_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g30207 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g10730 |
| Zosteraceae | Zostera marina | 1 | Zosma05g14260.v3.1 |