Basic Information
Locus ID:
Oco17G002770
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 6540389 | 6543782 | - | Oco17G002770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 103,516.35 Da | 35.49 | 108.54 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 1.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 680 | 942 | 2.3E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 204 | 263 | 5.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 141 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 583 | 5.78E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 670 | 951 | 9.98E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 192 | 1.59E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 320 | 6.9E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 758 | 965 | 3.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 608 | 1.3E-78 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 757 | 5.3E-20 | - |
| SMART | SM00220 | serkin_6 | 678 | 947 | 8.4E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 226 | 250 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 514 | 538 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 127 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 202 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 274 | 298 | 25.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 947 | 37.304585 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 802 | 814 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 514 | 527 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 107 | 120 | 3.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_015611880.1 | receptor-like protein kinase HSL1 [Oryza sativa Japonica Group] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LZU6 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology