Basic Information
Locus ID:
Oco17G001930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 5214497 | 5219197 | - | Oco17G001930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 129,904.88 Da | 33.46 | 102.36 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 360 | 418 | 1.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 699 | 754 | 8.8E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 76 | 1.0E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 917 | 1185 | 5.2E-46 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 182 | 199 | 0.11 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 682 | 810 | 1.08E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 897 | 1187 | 9.84E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 323 | 620 | 6.43E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 87 | 420 | 2.98E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 991 | 1202 | 8.3E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 134 | 2.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 877 | 990 | 3.1E-36 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 634 | 691 | 1.2E-276 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 811 | 1.2E-276 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 456 | 480 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 206 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 741 | 765 | 56.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 915 | 1187 | 1.8E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 405 | 431 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 577 | 601 | 100.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 407 | 428 | 8.08929 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 915 | 1199 | 38.633183 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1037 | 1049 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 921 | 944 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_015612606.1 | brassinosteroid LRR receptor kinase BRL1 [Oryza sativa Japonica Group] | 0 |
| Q69JN6 | Brassinosteroid LRR receptor kinase BRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL1 PE=2 SV=1 | 0 | |
| TrEMBL | B9G2N1 | non-specific serine/threonine protein kinase OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_28729 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology