Basic Information
Locus ID:
Oco17G000030
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein of unknown function, DUF573
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG17 | 84304 | 96306 | - | Oco17G000030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 60,162.41 Da | 55.03 | 71.06 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04504 | Protein of unknown function, DUF573 | 79 | 165 | 2.7E-12 | IPR007592 |
| Pfam | PF03017 | TNP1/EN/SPM transposase | 444 | 500 | 1.7E-17 | IPR004264 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
| Coils | Coil | Coil | 299 | 319 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61730.1 | DNA-binding storekeeper protein-related transcriptional regulator. | 0 |
| RefSeq | XP_052167210.1 | uncharacterized protein LOC127784069 isoform X1 [Oryza glaberrima] | 0 |
| TrEMBL | B9F825 | Transposase_23 domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_13489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology