Basic Information
Locus ID:
Oco16G011920
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 17584030 | 17586721 | - | Oco16G011920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 79,508.40 Da | 48.32 | 84.35 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 82 | 8.8E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 422 | 634 | 2.0E-26 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 232 | 4.16E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 708 | 6.37E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 494 | 2.2E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 153 | 4.4E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 243 | 4.6E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 729 | 1.9E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 723 | 23.778347 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 743 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 395 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006660296.2 | pollen receptor-like kinase 4 [Oryza brachyantha] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5WFQ6 | Protein kinase domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0010g7828 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology