Basic Information
Locus ID:
Oco16G010450
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 15994542 | 15998785 | - | Oco16G010450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 88,486.84 Da | 43.03 | 78.96 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 88 | 284 | 1.28344E-96 | - |
| Pfam | PF00183 | Hsp90 protein | 266 | 764 | 1.1E-191 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 102 | 261 | 1.7E-12 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 615 | 736 | 1.57E-33 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 78 | 294 | 3.27E-61 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 336 | 594 | 1.29E-90 | IPR020568 |
| Gene3D | G3DSA:3.30.565.10 | - | 64 | 309 | 3.0E-87 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 507 | 594 | 4.2E-32 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 334 | 506 | 4.4E-74 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 595 | 740 | 2.6E-52 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 101 | 263 | 2.9E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 57 | 778 | 1.3E-237 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 99 | 108 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 251 | 268 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 100 | 122 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 196 | 218 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 79 | 99 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 167 | 184 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 149 | 166 | 5.8E-61 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 270 | 288 | 5.8E-61 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 737 | 26.116087 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 746 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 772 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_040382555.1 | heat shock protein 90-5, chloroplastic-like [Oryza brachyantha] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LW74 | HATPase_c domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology