Basic Information
Locus ID:
Oco16G009060
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 14124819 | 14134360 | + | Oco16G009060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 202,388.03 Da | 50.89 | 77.42 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1536 | 1798 | 1.0965E-145 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 402 | 674 | 3.56016E-138 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1575 | 1740 | 3.0E-32 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1741 | 1796 | 1.3E-6 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 61 | 126 | 1.6E-16 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 423 | 670 | 2.7E-33 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1534 | 1798 | 5.69E-76 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 468 | 640 | 2.88E-42 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 59 | 129 | 8.15E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 52 | 142 | 3.6E-20 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1522 | 1656 | 3.8E-34 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 467 | 640 | 1.2E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1659 | 1799 | 1.2E-40 | - |
| SMART | SM00064 | fyve_4 | 56 | 129 | 4.5E-19 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1501 | 1799 | 2.9E-120 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 64 | 128 | 13.042163 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1472 | 1798 | 56.144936 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1212 | 1271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 177 | - | - |
| Coils | Coil | Coil | 1127 | 1147 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_015649930.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Oryza sativa Japonica Group] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0LVG2 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology