Basic Information
Locus ID:
Oco16G008920
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG16 | 13824990 | 13830292 | - | Oco16G008920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 71,758.16 Da | 37.68 | 97.92 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 117 | 177 | 1.4E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 7.8E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 324 | 592 | 2.1E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 189 | 1.96E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 305 | 596 | 5.06E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 298 | 398 | 4.7E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 206 | 2.2E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 614 | 1.2E-57 | - |
| SMART | SM00220 | serkin_6 | 322 | 595 | 1.2E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 605 | 35.156216 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 441 | 453 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 119 | 132 | 5.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 164 | 177 | 5.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015651005.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CJA3 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_028692 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology